Dimensionality Reduction
Dimensionality Reduction of Massive Sparse Datasets Using Coresets
Dan Feldman, Mikhail Volkov, Daniela Rus
In this paper we present a practical solution with performance guarantees to the problem of dimensionality reduction for very large scale sparse matrices. We show applications of our approach to computing the Principle Component Analysis (PCA) of any n dmatrix, using one pass over the stream of its rows. Our solution uses coresets: a scaled subset of the n rows that approximates their sum of squared distances to every k-dimensional affine subspace. An open theoretical problem has been to compute such a coreset that is independent of both n and d. An open practical problem has been to compute a non-trivial approximation to the PCA of very large but sparse databases such as the Wikipedia document-term matrix in a reasonable time. We answer both of these questions affirmatively. Our main technical result is a new framework for deterministic coreset constructions based on a reduction to the problem of counting items in a stream.
NE: Surrogate-Assisted Federated Neighbor Embedding for Dimensionality Reduction
Despite its broad applications in fields such as computer vision, graph learning, and natural language processing, the development of a data projection model that can be effectively used to visualize data in the context of FL is crucial yet remains heavily under-explored. Neighbor embedding (NE) is an essential technique for visualizing complex high-dimensional data, but collab-oratively learning a joint NE model is difficult.
Probabilistic Foundations of Fuzzy Simplicial Sets for Nonlinear Dimensionality Reduction
Keck, Janis, Barth, Lukas Silvester, Fatemeh, null, Fahimi, null, Joharinad, Parvaneh, Jost, Jürgen
Fuzzy simplicial sets have become an object of interest in dimensionality reduction and manifold learning, most prominently through their role in UMAP. However, their definition through tools from algebraic topology without a clear probabilistic interpretation detaches them from commonly used theoretical frameworks in those areas. In this work we introduce a framework that explains fuzzy simplicial sets as marginals of probability measures on simplicial sets. In particular, this perspective shows that the fuzzy weights of UMAP arise from a generative model that samples Vietoris-Rips filtrations at random scales, yielding cumulative distribution functions of pairwise distances. More generally, the framework connects fuzzy simplicial sets to probabilistic models on the face poset, clarifies the relation between Kullback-Leibler divergence and fuzzy cross-entropy in this setting, and recovers standard t-norms and t-conorms via Boolean operations on the underlying simplicial sets. We then show how new embedding methods may be derived from this framework and illustrate this on an example where we generalize UMAP using Čech filtrations with triplet sampling. In summary, this probabilistic viewpoint provides a unified probabilistic theoretical foundation for fuzzy simplicial sets, clarifies the role of UMAP within this framework, and enables the systematic derivation of new dimensionality reduction methods.